;; -*- lexical-binding: t -*-
;; DO NOT EDIT THIS FILE
;; This file was generated from the .config/doom/README.org file
;; in the following repo: https://git.bajsicki.com/phil/dot/

(setq user-full-name "Phil Bajsicki")

(setq-default backup-inhibited t)
(setq global-auto-revert-mode t)
(setq-default indent-tabs-mode t)

(setq find-file-visit-truename t)

(setq auth-sources '("~/.authinfo"))

(setq locale-coding-system 'utf-8)
(set-terminal-coding-system 'utf-8)
(set-keyboard-coding-system 'utf-8)
(set-clipboard-coding-system 'utf-8)
(prefer-coding-system 'utf-8)

(setq langtool-java-bin "/usr/bin/java")

(after! counsel
  (setq counsel-outline-display-style 'title))

(load-theme 'doom-one t)
(doom-themes-neotree-config)
(doom-themes-org-config)

(menu-bar-mode -1)
(tool-bar-mode -1)
(scroll-bar-mode -1)

(modify-all-frames-parameters
 '((right-divider-width . 0)
   (internal-border-width . 0)))
(dolist (face '(window-divider
                window-divider-first-pixel
                window-divider-last-pixel))
  (face-spec-reset-face face)
  (set-face-foreground face (face-attribute 'default :background)))
(set-face-background 'fringe (face-attribute 'default :background))

(set-frame-parameter nil 'alpha-background 85)
(add-to-list 'default-frame-alist '(alpha-background . 85))

  (setq doom-themes-enable-bold t
        doom-themes-enable-italic t
        doom-font (font-spec :family "Iosevka" :size 14)
        doom-big-font (font-spec :family "Iosevka" :size 16)
        ;; doom-variable-pitch-font (font-spec :family "Iosevka" :size 14)
        doom-unicode-font (font-spec :family "Iosevka"))
        ;; doom-serif-font (font-spec :family "IBM Plex Mono" :size 10 :weight 'light))

;; (set-face-attribute 'default nil :family "Iosevka")
;; (set-face-attribute 'variable-pitch nil :family "Iosevka Aile")
;; (set-face-attribute 'org-modern-symbol nil :family "Iosevka")

(ligature-set-ligatures 't '("www"))
;; Enable traditional ligature support in eww-mode, if the
;; `variable-pitch' face supports it
(ligature-set-ligatures 'eww-mode '("ff" "fi" "ffi"))
;; Enable all Cascadia Code ligatures in programming modes
(ligature-set-ligatures 'org-mode '("|||>" "<|||" "<==>" "<!--" "####" "~~>" "***" "||=" "||>"
                                     ":::" "::=" "=:=" "===" "==>" "=!=" "=>>" "=<<" "=/=" "!=="
                                     "!!." ">=>" ">>=" ">>>" ">>-" ">->" "->>" "-->" "---" "-<<"
                                     "<~~" "<~>" "<*>" "<||" "<|>" "<$>" "<==" "<=>" "<=<" "<->"
                                     "<--" "<-<" "<<=" "<<-" "<<<" "<+>" "</>" "###" "#_(" "..<"
                                     "..." "+++" "/==" "///" "_|_" "www" "&&" "^=" "~~" "~@" "~="
                                     "~>" "~-" "**" "*>" "*/" "||" "|}" "|]" "|=" "|>" "|-" "{|"
                                     "[|" "]#" "::" ":=" ":>" ":<" "$>" "==" "=>" "!=" "!!" ">:"
                                     ">=" ">>" ">-" "-~" "-|" "->" "--" "-<" "<~" "<*" "<|" "<:"
                                     "<$" "<=" "<>" "<-" "<<" "<+" "</" "#{" "#[" "#:" "#=" "#!"
                                     "##" "#(" "#?" "#_" "%%" ".=" ".-" ".." ".?" "+>" "++" "?:"
                                     "?=" "?." "??" ";;" "/*" "/=" "/>" "//" "__" "~~" "(*" "*)"
                                     "\\\\" "://"))
;; Enables ligature checks globally in all buffers.  You can also do it
;; per mode with `ligature-mode'.
(global-ligature-mode t)

(setq display-line-numbers-type 'relative) ;; best honestly
(setq-default global-visual-line-mode t)
(setq column-number-mode t)
(setq next-screen-context-lines 4)
(setq x-stretch-cursor t)

(global-set-key "\C-g" 'keyboard-quit)
(global-set-key "\C-cu" 'browse-url-chrome)

(setq straight-repository-branch "develop")

;; must be set before `org` is loaded

(add-to-list 'auto-mode-alist
           '("\\.org\\'" . org-mode))

(setq-default calendar-week-start-day 1)

(setq org-contacts-files '("~/enc/org/people.org"))
(setq org-directory "~/enc/org/")

(setq org-agenda-files (directory-files-recursively "~/enc/org/" ".org$"))1

(setq org-refile-targets '((nil :maxlevel . 9)
                                (org-agenda-files :maxlevel . 9)))
(setq org-outline-path-complete-in-steps nil)
(setq org-refile-use-outline-path 'file)

(setq org-image-actual-width '(0.8))

(setq org-footnote-auto-adjust t)
(setq org-footnote-define-inline t)

(global-org-modern-mode)

(setq org-read-date-prefer-future t)

(setq org-reverse-note-order nil)

(setq org-blank-before-new-entry (quote ((heading . nil)
					 (plain-list-item . nil))))

(setq org-catch-invisible-edits "smart")

(setq org-special-ctrl-a/e t)
(setq org-special-ctrl-k t)

(setq org-yank-adjusted-subtrees t)

(setq org-M-RET-may-split-line '((headline . t)
				 (item . t)
				 (default . nil)))

(setq org-insert-heading-respect-content nil)

(setq org-footnote-section nil)

(setq org-log-done (quote time)
      org-log-into-drawer t
      org-clock-into-drawer t)

(setq org-treat-insert-todo-heading-as-state-change nil)

(setq org-use-property-inheritance nil)
;;(setq org-use-property-inheritance '(category columns archive logging))

(setq-default org-enforce-todo-dependencies t)
(setq org-enforce-todo-checkbox-dependencies t)

(setq org-deadline-warning-days 7)

(setq org-provide-todo-statistics t
      org-hierarchical-todo-statistics t)

(setq org-todo-repeat-to-state "LOOP")

(setq org-todo-keywords
      '((sequence
         "INBOX(i!)"
         "TASK(t!)"  ; A task that needs doing & is ready to do
         "PROJ(p!)"  ; A project, which usually contains other tasks
         "LOOP(r!)"  ; A recurring task
         "WAIT(w!)"  ; Something external is holding up this task
         "HOLD(h!)"  ; This task is paused/on hold because of me
         "|"
         "DONE(d!@)"  ; Task successfully completed
         "KILL(k!@)") ; Task was cancelled, aborted or is no longer applicable
        (sequence
         "DECIDE()"   ; for making decisions
         "|"
         "OKAY(o!)"    ; okay as-is
         "YES(y!)"     ; take action
         "NO(n!)"))    ; don't take action
      org-todo-keyword-faces
      '(
        ("INBOX"     :foreground "cyan"   :weight bold)
        ("TASK"      :foreground "purple"   :weight bold)
        ("PROJ"      :foreground "violet"         :weight bold)
        ("LOOP"      :foreground "magenta"      :weight bold)
        ("WAIT"      :foreground "yellow"       :weight bold)
        ("HOLD"      :foreground "orange"       :weight bold)
        ("DONE"      :foreground "green" :weight bold)
        ("KILL"      :foreground "grey"   :weight bold)))

(setq org-fontify-done-headline t)
(custom-set-faces
 '(org-done ((t (:foreground "PaleGreen"
                 :weight normal
                 :strike-through t))))
 '(org-headline-done
            ((((class color) (min-colors 16) (background dark))
               (:foreground "LightSalmon" :strike-through t)))))

(setq org-capture-templates '(("t" "inbox" entry (file+headline "~/enc/org/agenda.org" "Inbox") "* %i%?")
                              ("i" "idea" entry (file+headline "~/enc/org/agenda.org" "Ideas") "* %?")
                              ("d" "reminder" entry (file+headline "~/enc/org/agenda.org" "Reminders") "* %i%? \n %U")
                              ("p" "person" entry (file+headline "~/enc/org/people.org" "Sort")
                               "* %(org-contacts-template-name)
:PROPERTIES:
:EMAIL: %(org-contacts-template-email)
:PHONE:
:ALIAS:
:NICKNAME:
:IGNORE:
:ICON:
:NOTE:
:ADDRESS:
:BIRTHDAY:
:END:")))

(global-set-key "\C-cl" 'org-store-link)
(global-set-key "\C-cnn" 'org-capture)

(global-set-key "\C-cia"  '(lambda ()(interactive)
                               (org-time-stamp '(16))))
(global-set-key "\C-cii"  '(lambda () (interactive)
                               (org-time-stamp-inactive '(16))))

(setq org-roam-v2-ack t)
(setq org-roam-completion-everywhere t)
(setq org-roam-directory
      (file-truename "~/enc/org/roam"))
(org-roam-db-autosync-mode)
(org-roam-db-autosync-enable)

(setq org-roam-capture-templates
      '(("n" "default" plain
         "%?"
         :if-new (file+head "${slug}.org" "#+title: ${title}\n#+category: ${title}\n#+filetags: \n")
         :empty-lines 1
         :unnarrowed t)
        ("t" "Therapy" plain
         "#+title: ${title}\n"
         :if-new (file+head "therapy/therapy-${slug}.org" "#+title: ${title}\n#+category: 📗 ${title}\n#+filetags: 📗\n")
         :empty-lines 1
         :unnarrowed)))

(define-prefix-command 'org-roam-map)
(global-set-key "\C-r" 'org-roam-map)
(define-key org-roam-map "o" 'org-roam-buffer-toggle)
(define-key org-roam-map "f" 'org-roam-node-find)
(define-key org-roam-map "i" 'org-roam-node-insert)
(define-key org-roam-map "n" 'org-roam-capture)

(defun my-dir-to-org (dir org-file)
  "Create a file ORG-FILE which has all txt files in DIR as linked headlines
and the contents of the files below the headlines."
  (interactive "DDirectory to convert: \nFFilename: ")
  (let ((files (directory-files
                dir t ".*\\.txt\\'")))
    (with-temp-file org-file
      (dolist (file files)
        (insert (concat "* " (file-name-nondirectory file) "\n\n"))
        (insert-file-contents file)
        (goto-char (point-max))
        (insert "\n")))))

(defun my-dir-to-org-with-links (dir org-file)
  "Create a file ORG-FILE which has all txt files in DIR as linked headlines
and the contents of the files below the headlines."
  (interactive "DDirectory to convert: \nFFilename: ")
  (let ((files (directory-files
                dir t ".*\\.txt\\'")))
    (with-temp-file org-file
      (dolist (file files)
        (insert (concat "* " "[[" file "][" (file-name-nondirectory file) "]]\n\n"))
        (insert-file-contents file)
        (goto-char (point-max))
        (insert "\n")))))


(defun my-mass-conversion (source-dir target-dir)
  "Create one org file per directory of SOURCE-DIR inside TARGET-DIR."
  (interactive "DDirectory to convert: \nDTarget Directory:")
  (let ((dirs-full
         (remove-if-not #'file-directory-p
                        (directory-files
                         source-dir t
                         directory-files-no-dot-files-regexp))))

    (mapc (lambda (dir)
            (my-dir-to-org dir
                           (concat target-dir
                                   (file-name-base dir) ".org")))
          dirs-full)))

(defun my-org-tree-to-indirect-buffer (&optional arg)
  "Create indirect buffer and narrow it to current subtree.
The buffer is named after the subtree heading, with the filename
appended.  If a buffer by that name already exists, it is
selected instead of creating a new buffer."
  (interactive "P")
  (let* ((new-buffer-p)
         (pos (point))
w         (buffer-name (let* ((heading (org-get-heading t t))
                             (level (org-outline-level))
                             (face (intern (concat "outline-" (number-to-string level))))
                             (heading-string (propertize (org-link-display-format heading)
                                                         'face face)))
                        (concat heading-string "::" (buffer-name))))
         (new-buffer (or (get-buffer buffer-name)
                         (prog1 (condition-case nil
                                    (make-indirect-buffer (current-buffer) buffer-name 'clone)
                                  (error (make-indirect-buffer (current-buffer) buffer-name)))
                           (setq new-buffer-p t)))))
    (switch-to-buffer new-buffer)
    (when new-buffer-p
      ;; I don't understand why setting the point again is necessary, but it is.
      (goto-char pos)
      (rename-buffer buffer-name)
      (org-narrow-to-subtree))))

(advice-add 'org-tree-to-indirect-buffer :override 'my-org-tree-to-indirect-buffer)

(setq org-archive-default-command #'org-archive-subtree-hierarchically)

(defun org-archive-subtree-hierarchically (&optional prefix)
  (interactive "P")
  (let* ((fix-archive-p (and (not prefix)
                             (not (use-region-p))))
         (afile  (car (org-archive--compute-location
                       (or (org-entry-get nil "ARCHIVE" 'inherit) org-archive-location))))
         (buffer (or (find-buffer-visiting afile) (find-file-noselect afile))))
    (org-archive-subtree prefix)
    (when fix-archive-p
      (with-current-buffer buffer
        (goto-char (point-max))
        (while (org-up-heading-safe))
        (let* ((olpath (org-entry-get (point) "ARCHIVE_OLPATH"))
               (path (and olpath (split-string olpath "/")))
               (level 1)
               tree-text)
          (when olpath
            (org-mark-subtree)
            (setq tree-text (buffer-substring (region-beginning) (region-end)))
            (let (this-command (inhibit-message t)) (org-cut-subtree)) ; we don’t want to see "Cut subtree" messages
            (goto-char (point-min))
            (save-restriction
              (widen)
              (-each path
                (lambda (heading)
                  (if (re-search-forward
                       (rx-to-string
                        `(: bol (repeat ,level "*") (1+ " ") ,heading)) nil t)
                      (org-narrow-to-subtree)
                    (goto-char (point-max))
                    (unless (looking-at "^")
                      (insert "\n"))
                    (insert (make-string level ?*)
                            " "
                            heading
                            "\n"))
                  (cl-incf level)))
              (widen)
              (org-end-of-subtree t t)
              (org-paste-subtree level tree-text))))))))

(setq org-agenda-start-day nil)
(setq org-agenda-start-on-weekday nil)
(setq org-agenda-span 'day)

(setq org-agenda-dim-blocked-tasks t)
(setq org-agenda-compact-blocks t)

(setq org-agenda-skip-timestamp-if-deadline-is-shown t)

(setq org-agenda-skip-deadline-if-done t)
(setq org-agenda-skip-scheduled-if-done t)

(setq org-agenda-text-search-extra-files (quote (agenda-archives)))

(setq org-agenda-search-headline-for-time nil)

(setq org-agenda-show-all-dates t)

(setq org-agenda-log-mode-items '(closed clock state))

(setq org-agenda-sorting-strategy
		(quote ((agenda time-up user-defined-up priority-down category-keep)
				(todo priority-down category-keep)
				(tags priority-down category-keep)
				(search category-keep))))

(setq org-agenda-use-tag-inheritance (quote (agenda)))

(setq org-agenda-prefix-format '((agenda . " %l %i %c %s %t")
				 (todo . " %i %-12:c")
				 (tags . " %i $-12:c")
				 (search . " %i %-12:c")))

(setq org-agenda-tags-column -80
      org-agenda-block-separator ?─
      org-agenda-current-time-string "◀── now ─────────────────────────────────────────────────")

(setq org-agenda-time-grid
      '((daily today remove-match)
	(800 1000 1200 1400 1600 1800 2000)
	" ┄┄┄┄┄ "
	"┄┄┄┄┄┄┄┄┄┄┄┄┄┄┄"))

(add-hook 'org-agenda-mode-hook '(lambda () (hl-line-mode 1)))

(add-to-list 'org-modules 'habit)
(setq org-habit-following-days 2
      org-habit-preceding-days 7
      org-habit-show-all-today nil
      org-habit-show-habits-only-for-today t
      org-habit-show-habits t)

(define-key org-mode-map (kbd "C-c h") 'org-habit-stats-view-habit-at-point)
(add-hook 'org-after-todo-state-change-hook 'org-habit-stats-update-properties)

(global-set-key (kbd "C-S-c C-S-c") 'mc/edit-lines)
(global-set-key (kbd "C->") 'mc/mark-next-like-this)
(global-set-key (kbd "C-<") 'mc/mark-previous-like-this)
(global-set-key (kbd "C-c C-<") 'mc/mark-all-like-this)

(require 'org-auto-tangle)
(add-hook 'org-mode-hook 'org-auto-tangle-mode)

(use-package! org-expiry)
(after! org
  (add-hook! 'org-insert-heading-hook
          (if (or
	       (string-match-p "journal.org" buffer-file-name)
	       (string-match-p "money.org" buffer-file-name)
	       (string-match-p "therapy.org" buffer-file-name))
              (progn
		(org-time-stamp-inactive '(16))
		(newline))
	    (org-expiry-insert-created))))

(add-hook 'org-babel-after-execute-hook 'org-display-inline-images)

(require 'org-crypt)
(require 'epa-file)
(epa-file-enable)
(org-crypt-use-before-save-magic)
(setq org-tags-exclude-from-inheritance (quote ("crypt")))
(setq org-crypt-key "phil@bajsicki.com")
(setenv "GPG_AGENT_INFO" nil)

(with-eval-after-load 'ox-latex
   (add-to-list 'org-latex-classes
		'("tufte-handout"
                  "\\documentclass[nobib]{tufte-handout}
                   \\usepackage{nicefrac}
                   \\usepackage{units}
                   [NO-DEFAULT-PACKAGES]
                   [EXTRA]"
                  ("\\section{%s}" . "\\section*{%s}")
                  ("\\subsection{%s}" . "\\subsection*{%s}")
                  ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
                  ("\\paragraph{%s}" . "\\paragraph*{%s}")
                  ("\\subparagraph{%s}" . "\\subparagraph*{%s}"))
		'("memoir"
                  "\\documentclass{memoir}"
                  ("\\chapter{%s}" . "\\chapter*{%s}")
                  ("\\section{%s}" . "\\section*{%s}")
                  ("\\subsection{%s}" . "\\subsection*{%s}")
                  ("\\subsubsection{%s}" . "\\subsubsection*{%s}"))))

(use-package! ox-hugo
  :ensure t
  :after ox)

(use-package! org-transclusion
             :after org
              :init
              (map!
               :map global-map "<f12>" #'org-transclusion-add
               :leader
               :prefix "n"
               :desc "Org Transclusion Mode" "t" #'org-transclusion-mode))

  (org-wild-notifier-mode)
  (setq alert-default-style 'libnotify
        org-wild-notifier-alert-time '(0 5 15 60)
        org-wild-notifier-keyword-whitelist nil
        ;; good for testing
        org-wild-notifier--alert-severity 'high
        alert-fade-time 50)

(add-to-list 'load-path "/usr/share/emacs/site-lisp/mu4e/")

(setq mu4e-change-filenames-when-moving t)
(setq mu4e-update-interval (* 10 60))
(setq mu4e-get-mail-command "mbsync -a")
(setq mu4e-maildir "~/enc/.mail")

(setq mu4e-drafts-folder "/Drafts")
(setq mu4e-sent-folder "/Sent")
(setq mu4e-refile-folder "/Refile")
(setq mu4e-trash-folder "/Trash")

(mu4e t)

(setq my-credentials-file "~/enc/keys/emacs/circe.el")

(defun my-nickserv-password (server)
  (with-temp-buffer
    (insert-file-contents-literally my-credentials-file)
    (plist-get (read (buffer-string)) :nickserv-password)))

(setq circe-network-options
      '(("Libera Chat"
         :nick "phil_bb"
         :channels ("#emacs" "#emacs-circe")
         :nickserv-password my-nickserv-password)))

(use-package! pdf-tools
  :defer t
  :commands (pdf-loader-install)
  :mode "\\.pdf\\'"
  :bind (:map pdf-view-mode-map
	      ("n" . pdf-view-next-line-or-next-page)
	      ("p" . pdf-view-previous-line-or-previous-page)
	      ("C-=" . pdf-view-enlarge)
	      ("C--" . pdf-view-shrink))
  :init (pdf-loader-install)
  :config (add-to-list 'revert-without-query ".pdf"))

(add-hook 'pdf-view-mode-hook #'(lambda () (interactive (display-line-numbers-mode))))

(setq doom-snippets-enable-short-helpers t)

(add-to-list 'auto-mode-alist '("\\.[Cc][Ss][Vv]\\'" . csv-mode))
(autoload 'csv-mode "csv-mode"
    "Major mode for editing comma-separated value files." t)

;; (load (expand-file-name "~/.roswell/helper.el"))

(setq inferior-lisp-program "sbcl --dynamic-space-size 8192 -Q -l ~/.sbclrc")

(use-package! gptel)
(gptel-make-openai "ooba"          ;Any name
  :key "thisisanapikey"
  :stream t                             ;Stream responses
  :protocol "http"
  :host "localhost:6666"                ;Llama.cpp server location
  :models '("model")) ;Any names, doesn't matter for Llama

(gptel-make-openai "OpenRouter"
  :host "openrouter.ai"
  :endpoint "/api/v1/chat/completions"
  :key (getenv "GPTEL_OPENROUTER_API")
  :stream t                             ;Stream responses
  :models '(qwen/qwen-2.5-coder-32b-instruct))

(setq gptel--debug t)

(setq-default elfeed-search-filter "@1-week-ago +unread ")